Characterization of the Belowground Microbial Community in a Poplar-Phytoremediation Strategy of a Multi-Contaminated Soil.
Identifieur interne : 000520 ( Main/Exploration ); précédent : 000519; suivant : 000521Characterization of the Belowground Microbial Community in a Poplar-Phytoremediation Strategy of a Multi-Contaminated Soil.
Auteurs : Anna Barra Caracciolo [Italie] ; Paola Grenni [Italie] ; Gian Luigi Garbini [Italie] ; Ludovica Rolando [Italie] ; Claudia Campanale [Italie] ; Giorgia Aimola [Italie] ; Manuel Fernandez-Lopez [Espagne] ; Antonio José Fernandez-Gonzalez [Espagne] ; Pablo José Villadas [Espagne] ; Valeria Ancona [Italie]Source :
- Frontiers in microbiology [ 1664-302X ] ; 2020.
Abstract
Due to their widespread use in industrial applications in recent decades, Polychlorobiphenyls (PCBs) and heavy metals (HMs) are the most common soil contaminants worldwide, posing a risk for both ecosystems and human health. In this study, a poplar-assisted bioremediation strategy has been applied for more than 4 years to a historically contaminated area (PCBs and HMs) in Southern Italy using the Monviso poplar clone. This clone was effective in promoting a decrease in all contaminants and an increase in soil quality in terms of organic carbon and microbial abundance. Moreover, a significant shift in the structure and predicted function of the belowground microbial community was also observed when analyzing both DNA and cDNA sequencing data. In fact, an increase in bacterial genera belonging to Proteobacteria able to degrade PCBs and resist HMs was observed. Moreover, the functional profiling of the microbial community predicted by PICRUSt2 made it possible to identify several genes associated with PCB transformation (e.g., bphAa, bphAb, bphB, bphC), response to HM oxidative stress (e.g., catalase, superoxide reductase, peroxidase) and HM uptake and expulsion (e.g., ABC transporters). This work demonstrated the effectiveness of the poplar clone Monviso in stimulating the natural belowground microbial community to remove contaminants and improve the overall soil quality. It is a practical example of a nature based solution involving synergic interactions between plants and the belowground microbial community.
DOI: 10.3389/fmicb.2020.02073
PubMed: 32983051
PubMed Central: PMC7477336
Affiliations:
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Research Institute, Montelibretti (Rome)</wicri:regionArea><wicri:noRegion>Montelibretti (Rome)</wicri:noRegion></affiliation></author><author><name sortKey="Rolando, Ludovica" sort="Rolando, Ludovica" uniqKey="Rolando L" first="Ludovica" last="Rolando">Ludovica Rolando</name><affiliation wicri:level="1"><nlm:affiliation>National Research Council, Water Research Institute, Montelibretti (Rome), Italy.</nlm:affiliation><country xml:lang="fr">Italie</country><wicri:regionArea>National Research Council, Water Research Institute, Montelibretti (Rome)</wicri:regionArea><wicri:noRegion>Montelibretti (Rome)</wicri:noRegion></affiliation><affiliation wicri:level="1"><nlm:affiliation>Department of Ecological and Biological Sciences, University of Tuscia, Viterbo, Italy.</nlm:affiliation><country xml:lang="fr">Italie</country><wicri:regionArea>Department of Ecological and Biological Sciences, University of Tuscia, Viterbo</wicri:regionArea><wicri:noRegion>Viterbo</wicri:noRegion></affiliation></author><author><name sortKey="Campanale, Claudia" sort="Campanale, Claudia" uniqKey="Campanale C" first="Claudia" last="Campanale">Claudia Campanale</name><affiliation wicri:level="1"><nlm:affiliation>National Research Council, Water Research Institute, Bari, Italy.</nlm:affiliation><country xml:lang="fr">Italie</country><wicri:regionArea>National Research Council, Water Research Institute, Bari</wicri:regionArea><wicri:noRegion>Bari</wicri:noRegion></affiliation></author><author><name sortKey="Aimola, Giorgia" sort="Aimola, Giorgia" uniqKey="Aimola G" first="Giorgia" last="Aimola">Giorgia Aimola</name><affiliation wicri:level="1"><nlm:affiliation>National Research Council, Water Research Institute, Bari, Italy.</nlm:affiliation><country xml:lang="fr">Italie</country><wicri:regionArea>National Research Council, Water Research Institute, Bari</wicri:regionArea><wicri:noRegion>Bari</wicri:noRegion></affiliation></author><author><name sortKey="Fernandez Lopez, Manuel" sort="Fernandez Lopez, Manuel" uniqKey="Fernandez Lopez M" first="Manuel" last="Fernandez-Lopez">Manuel Fernandez-Lopez</name><affiliation wicri:level="1"><nlm:affiliation>Consejo Superior de Investigaciones Científicas (CSIC), Zaidin Experimental Station, Granada, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Consejo Superior de Investigaciones Científicas (CSIC), Zaidin Experimental Station, Granada</wicri:regionArea><wicri:noRegion>Granada</wicri:noRegion></affiliation></author><author><name sortKey="Fernandez Gonzalez, Antonio Jose" sort="Fernandez Gonzalez, Antonio Jose" uniqKey="Fernandez Gonzalez A" first="Antonio José" last="Fernandez-Gonzalez">Antonio José Fernandez-Gonzalez</name><affiliation wicri:level="1"><nlm:affiliation>Consejo Superior de Investigaciones Científicas (CSIC), Zaidin Experimental Station, Granada, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Consejo Superior de Investigaciones Científicas (CSIC), Zaidin Experimental Station, Granada</wicri:regionArea><wicri:noRegion>Granada</wicri:noRegion></affiliation></author><author><name sortKey="Villadas, Pablo Jose" sort="Villadas, Pablo Jose" uniqKey="Villadas P" first="Pablo José" last="Villadas">Pablo José Villadas</name><affiliation wicri:level="1"><nlm:affiliation>Consejo Superior de Investigaciones Científicas (CSIC), Zaidin Experimental Station, Granada, Spain.</nlm:affiliation><country xml:lang="fr">Espagne</country><wicri:regionArea>Consejo Superior de Investigaciones Científicas (CSIC), Zaidin Experimental Station, Granada</wicri:regionArea><wicri:noRegion>Granada</wicri:noRegion></affiliation></author><author><name sortKey="Ancona, Valeria" sort="Ancona, Valeria" uniqKey="Ancona V" first="Valeria" last="Ancona">Valeria Ancona</name><affiliation wicri:level="1"><nlm:affiliation>National Research Council, Water Research Institute, Bari, Italy.</nlm:affiliation><country xml:lang="fr">Italie</country><wicri:regionArea>National Research Council, Water Research Institute, Bari</wicri:regionArea><wicri:noRegion>Bari</wicri:noRegion></affiliation></author></analytic><series><title level="j">Frontiers in microbiology</title><idno type="ISSN">1664-302X</idno><imprint><date when="2020" type="published">2020</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en">Due to their widespread use in industrial applications in recent decades, Polychlorobiphenyls (PCBs) and heavy metals (HMs) are the most common soil contaminants worldwide, posing a risk for both ecosystems and human health. In this study, a poplar-assisted bioremediation strategy has been applied for more than 4 years to a historically contaminated area (PCBs and HMs) in Southern Italy using the Monviso poplar clone. This clone was effective in promoting a decrease in all contaminants and an increase in soil quality in terms of organic carbon and microbial abundance. Moreover, a significant shift in the structure and predicted function of the belowground microbial community was also observed when analyzing both DNA and cDNA sequencing data. In fact, an increase in bacterial genera belonging to <i>Proteobacteria</i> able to degrade PCBs and resist HMs was observed. Moreover, the functional profiling of the microbial community predicted by PICRUSt2 made it possible to identify several genes associated with PCB transformation (e.g., <i>bphAa</i>, <i>bphAb</i>, <i>bphB</i>, <i>bphC</i>), response to HM oxidative stress (e.g., catalase, superoxide reductase, peroxidase) and HM uptake and expulsion (e.g., ABC transporters). This work demonstrated the effectiveness of the poplar clone Monviso in stimulating the natural belowground microbial community to remove contaminants and improve the overall soil quality. It is a practical example of a nature based solution involving synergic interactions between plants and the belowground microbial community.</div></front></TEI><pubmed><MedlineCitation Status="PubMed-not-MEDLINE" Owner="NLM"><PMID Version="1">32983051</PMID><DateRevised><Year>2020</Year><Month>10</Month><Day>01</Day></DateRevised><Article PubModel="Electronic-eCollection"><Journal><ISSN IssnType="Print">1664-302X</ISSN><JournalIssue CitedMedium="Print"><Volume>11</Volume><PubDate><Year>2020</Year></PubDate></JournalIssue><Title>Frontiers in microbiology</Title><ISOAbbreviation>Front Microbiol</ISOAbbreviation></Journal><ArticleTitle>Characterization of the Belowground Microbial Community in a Poplar-Phytoremediation Strategy of a Multi-Contaminated Soil.</ArticleTitle><Pagination><MedlinePgn>2073</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.3389/fmicb.2020.02073</ELocationID><Abstract><AbstractText>Due to their widespread use in industrial applications in recent decades, Polychlorobiphenyls (PCBs) and heavy metals (HMs) are the most common soil contaminants worldwide, posing a risk for both ecosystems and human health. In this study, a poplar-assisted bioremediation strategy has been applied for more than 4 years to a historically contaminated area (PCBs and HMs) in Southern Italy using the Monviso poplar clone. This clone was effective in promoting a decrease in all contaminants and an increase in soil quality in terms of organic carbon and microbial abundance. Moreover, a significant shift in the structure and predicted function of the belowground microbial community was also observed when analyzing both DNA and cDNA sequencing data. In fact, an increase in bacterial genera belonging to <i>Proteobacteria</i> able to degrade PCBs and resist HMs was observed. Moreover, the functional profiling of the microbial community predicted by PICRUSt2 made it possible to identify several genes associated with PCB transformation (e.g., <i>bphAa</i>, <i>bphAb</i>, <i>bphB</i>, <i>bphC</i>), response to HM oxidative stress (e.g., catalase, superoxide reductase, peroxidase) and HM uptake and expulsion (e.g., ABC transporters). This work demonstrated the effectiveness of the poplar clone Monviso in stimulating the natural belowground microbial community to remove contaminants and improve the overall soil quality. It is a practical example of a nature based solution involving synergic interactions between plants and the belowground microbial community.</AbstractText><CopyrightInformation>Copyright © 2020 Barra Caracciolo, Grenni, Garbini, Rolando, Campanale, Aimola, Fernandez-Lopez, Fernandez-Gonzalez, Villadas and Ancona.</CopyrightInformation></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Barra Caracciolo</LastName><ForeName>Anna</ForeName><Initials>A</Initials><AffiliationInfo><Affiliation>National Research Council, Water Research Institute, Montelibretti (Rome), Italy.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Grenni</LastName><ForeName>Paola</ForeName><Initials>P</Initials><AffiliationInfo><Affiliation>National Research Council, Water Research Institute, Montelibretti (Rome), Italy.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Garbini</LastName><ForeName>Gian Luigi</ForeName><Initials>GL</Initials><AffiliationInfo><Affiliation>National Research Council, Water Research Institute, Montelibretti (Rome), Italy.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Rolando</LastName><ForeName>Ludovica</ForeName><Initials>L</Initials><AffiliationInfo><Affiliation>National Research Council, Water Research Institute, Montelibretti (Rome), Italy.</Affiliation></AffiliationInfo><AffiliationInfo><Affiliation>Department of Ecological and Biological Sciences, University of Tuscia, Viterbo, Italy.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Campanale</LastName><ForeName>Claudia</ForeName><Initials>C</Initials><AffiliationInfo><Affiliation>National Research Council, Water Research Institute, Bari, Italy.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Aimola</LastName><ForeName>Giorgia</ForeName><Initials>G</Initials><AffiliationInfo><Affiliation>National Research Council, Water Research Institute, Bari, Italy.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Fernandez-Lopez</LastName><ForeName>Manuel</ForeName><Initials>M</Initials><AffiliationInfo><Affiliation>Consejo Superior de Investigaciones Científicas (CSIC), Zaidin Experimental Station, Granada, Spain.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Fernandez-Gonzalez</LastName><ForeName>Antonio José</ForeName><Initials>AJ</Initials><AffiliationInfo><Affiliation>Consejo Superior de Investigaciones Científicas (CSIC), Zaidin Experimental Station, Granada, Spain.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Villadas</LastName><ForeName>Pablo José</ForeName><Initials>PJ</Initials><AffiliationInfo><Affiliation>Consejo Superior de Investigaciones Científicas (CSIC), Zaidin Experimental Station, Granada, Spain.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Ancona</LastName><ForeName>Valeria</ForeName><Initials>V</Initials><AffiliationInfo><Affiliation>National Research Council, Water Research Institute, Bari, Italy.</Affiliation></AffiliationInfo></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2020</Year><Month>08</Month><Day>25</Day></ArticleDate></Article><MedlineJournalInfo><Country>Switzerland</Country><MedlineTA>Front Microbiol</MedlineTA><NlmUniqueID>101548977</NlmUniqueID><ISSNLinking>1664-302X</ISSNLinking></MedlineJournalInfo><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">DNA and cDNA Illumina sequencing</Keyword><Keyword MajorTopicYN="N">bioremediation</Keyword><Keyword MajorTopicYN="N">heavy metals</Keyword><Keyword MajorTopicYN="N">nature based solution</Keyword><Keyword 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1;8(1):11</Citation><ArticleIdList><ArticleId IdType="pubmed">32007096</ArticleId></ArticleIdList></Reference><Reference><Citation>ISME J. 2020 Oct;14(10):2433-2448</Citation><ArticleIdList><ArticleId IdType="pubmed">32641729</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Methods. 2013 Oct;10(10):996-8</Citation><ArticleIdList><ArticleId IdType="pubmed">23955772</ArticleId></ArticleIdList></Reference><Reference><Citation>J Environ Public Health. 2013;2013:158764</Citation><ArticleIdList><ArticleId IdType="pubmed">23843802</ArticleId></ArticleIdList></Reference><Reference><Citation>Environ Pollut. 2004 Nov;132(1):145-55</Citation><ArticleIdList><ArticleId IdType="pubmed">15276282</ArticleId></ArticleIdList></Reference><Reference><Citation>Trends Plant Sci. 2018 Jan;23(1):25-41</Citation><ArticleIdList><ArticleId IdType="pubmed">29050989</ArticleId></ArticleIdList></Reference><Reference><Citation>J Bacteriol. 1983 Jun;154(3):1363-70</Citation><ArticleIdList><ArticleId IdType="pubmed">6853447</ArticleId></ArticleIdList></Reference><Reference><Citation>Int J Phytoremediation. 2016;18(2):141-9</Citation><ArticleIdList><ArticleId IdType="pubmed">26292091</ArticleId></ArticleIdList></Reference><Reference><Citation>World J Microbiol Biotechnol. 2017 Feb;33(2):35</Citation><ArticleIdList><ArticleId IdType="pubmed">28120310</ArticleId></ArticleIdList></Reference><Reference><Citation>Eur J Biochem. 1971 Jun 11;20(3):400-13</Citation><ArticleIdList><ArticleId IdType="pubmed">4325686</ArticleId></ArticleIdList></Reference><Reference><Citation>Environ Toxicol Chem. 2005 May;24(5):1035-40</Citation><ArticleIdList><ArticleId IdType="pubmed">16110979</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS Comput Biol. 2009 Aug;5(8):e1000465</Citation><ArticleIdList><ArticleId IdType="pubmed">19680427</ArticleId></ArticleIdList></Reference><Reference><Citation>Sci Rep. 2019 Feb 8;9(1):1695</Citation><ArticleIdList><ArticleId IdType="pubmed">30737434</ArticleId></ArticleIdList></Reference><Reference><Citation>Bioinformatics. 2018 Mar 15;34(6):1053-1055</Citation><ArticleIdList><ArticleId IdType="pubmed">29091997</ArticleId></ArticleIdList></Reference><Reference><Citation>Annu Rev Microbiol. 2004;58:43-73</Citation><ArticleIdList><ArticleId IdType="pubmed">15487929</ArticleId></ArticleIdList></Reference><Reference><Citation>Front Microbiol. 2018 Jun 05;9:1006</Citation><ArticleIdList><ArticleId IdType="pubmed">29922245</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Rev Microbiol. 2013 Nov;11(11):789-99</Citation><ArticleIdList><ArticleId IdType="pubmed">24056930</ArticleId></ArticleIdList></Reference><Reference><Citation>J Bacteriol. 1981 May;146(2):639-46</Citation><ArticleIdList><ArticleId IdType="pubmed">7217013</ArticleId></ArticleIdList></Reference><Reference><Citation>Curr Microbiol. 2003 Apr;46(4):235-40</Citation><ArticleIdList><ArticleId IdType="pubmed">12732969</ArticleId></ArticleIdList></Reference><Reference><Citation>Microbiome. 2018 Apr 2;6(1):63</Citation><ArticleIdList><ArticleId IdType="pubmed">29609653</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2019 Mar 25;14(3):e0214422</Citation><ArticleIdList><ArticleId IdType="pubmed">30908541</ArticleId></ArticleIdList></Reference><Reference><Citation>Sci Total Environ. 2019 Jul 10;673:7-19</Citation><ArticleIdList><ArticleId IdType="pubmed">30981201</ArticleId></ArticleIdList></Reference><Reference><Citation>Environ Sci Pollut Res Int. 2014 Oct;21(20):11951-72</Citation><ArticleIdList><ArticleId IdType="pubmed">24943885</ArticleId></ArticleIdList></Reference><Reference><Citation>Appl Environ Microbiol. 2009 Dec;75(23):7537-41</Citation><ArticleIdList><ArticleId IdType="pubmed">19801464</ArticleId></ArticleIdList></Reference><Reference><Citation>Ecotoxicol Environ Saf. 2007 Feb;66(2):204-9</Citation><ArticleIdList><ArticleId IdType="pubmed">16600377</ArticleId></ArticleIdList></Reference><Reference><Citation>Chemosphere. 2007 Apr;67(9):1822-30</Citation><ArticleIdList><ArticleId IdType="pubmed">17234238</ArticleId></ArticleIdList></Reference><Reference><Citation>Sci Total Environ. 2010 Feb 1;408(5):1007-13</Citation><ArticleIdList><ArticleId IdType="pubmed">19995667</ArticleId></ArticleIdList></Reference><Reference><Citation>Chemosphere. 2008 Jan;70(3):364-73</Citation><ArticleIdList><ArticleId IdType="pubmed">17870145</ArticleId></ArticleIdList></Reference><Reference><Citation>Sci Total Environ. 2012 May 15;425:262-70</Citation><ArticleIdList><ArticleId IdType="pubmed">22475220</ArticleId></ArticleIdList></Reference><Reference><Citation>Environ Sci Technol. 2010 Apr 15;44(8):2767-76</Citation><ArticleIdList><ArticleId IdType="pubmed">20384372</ArticleId></ArticleIdList></Reference><Reference><Citation>Front Microbiol. 2016 Jun 16;7:933</Citation><ArticleIdList><ArticleId IdType="pubmed">27379063</ArticleId></ArticleIdList></Reference><Reference><Citation>PLoS One. 2012;7(7):e40653</Citation><ArticleIdList><ArticleId IdType="pubmed">22808223</ArticleId></ArticleIdList></Reference><Reference><Citation>Nat Methods. 2013 Jan;10(1):57-9</Citation><ArticleIdList><ArticleId IdType="pubmed">23202435</ArticleId></ArticleIdList></Reference><Reference><Citation>N Biotechnol. 2017 Sep 25;38(Pt B):65-73</Citation><ArticleIdList><ArticleId IdType="pubmed">27686395</ArticleId></ArticleIdList></Reference><Reference><Citation>J Basic Microbiol. 2014 Apr;54(4):253-60</Citation><ArticleIdList><ArticleId IdType="pubmed">23553615</ArticleId></ArticleIdList></Reference><Reference><Citation>Front Microbiol. 2016 Feb 05;7:92</Citation><ArticleIdList><ArticleId IdType="pubmed">26903971</ArticleId></ArticleIdList></Reference><Reference><Citation>J Bacteriol. 1992 Feb;174(3):711-24</Citation><ArticleIdList><ArticleId IdType="pubmed">1732207</ArticleId></ArticleIdList></Reference><Reference><Citation>Chemosphere. 2018 Feb;193:270-277</Citation><ArticleIdList><ArticleId IdType="pubmed">29141235</ArticleId></ArticleIdList></Reference><Reference><Citation>J Microbiol Methods. 2003 Dec;55(3):541-55</Citation><ArticleIdList><ArticleId IdType="pubmed">14607398</ArticleId></ArticleIdList></Reference><Reference><Citation>J Bacteriol. 1991 Aug;173(15):4587-94</Citation><ArticleIdList><ArticleId IdType="pubmed">1856161</ArticleId></ArticleIdList></Reference><Reference><Citation>ISME J. 2007 Aug;1(4):283-90</Citation><ArticleIdList><ArticleId IdType="pubmed">18043639</ArticleId></ArticleIdList></Reference><Reference><Citation>Sci Total Environ. 2010 Jul 1;408(15):2995-3043</Citation><ArticleIdList><ArticleId IdType="pubmed">19910021</ArticleId></ArticleIdList></Reference><Reference><Citation>Environ Res. 2017 Nov;159:509-518</Citation><ArticleIdList><ArticleId IdType="pubmed">28886502</ArticleId></ArticleIdList></Reference><Reference><Citation>Curr Opin Biotechnol. 2009 Dec;20(6):642-50</Citation><ArticleIdList><ArticleId IdType="pubmed">19875278</ArticleId></ArticleIdList></Reference></ReferenceList></PubmedData></pubmed><affiliations><list><country><li>Espagne</li><li>Italie</li></country></list><tree><country name="Italie"><noRegion><name sortKey="Barra Caracciolo, Anna" sort="Barra Caracciolo, Anna" uniqKey="Barra Caracciolo A" first="Anna" last="Barra Caracciolo">Anna Barra Caracciolo</name></noRegion><name sortKey="Aimola, Giorgia" sort="Aimola, Giorgia" uniqKey="Aimola G" first="Giorgia" last="Aimola">Giorgia Aimola</name><name sortKey="Ancona, Valeria" sort="Ancona, Valeria" uniqKey="Ancona V" first="Valeria" last="Ancona">Valeria Ancona</name><name sortKey="Campanale, Claudia" sort="Campanale, Claudia" uniqKey="Campanale C" first="Claudia" last="Campanale">Claudia Campanale</name><name sortKey="Garbini, Gian Luigi" sort="Garbini, Gian Luigi" uniqKey="Garbini G" first="Gian Luigi" last="Garbini">Gian Luigi Garbini</name><name sortKey="Grenni, Paola" sort="Grenni, Paola" uniqKey="Grenni P" first="Paola" last="Grenni">Paola Grenni</name><name sortKey="Rolando, Ludovica" sort="Rolando, Ludovica" uniqKey="Rolando L" first="Ludovica" last="Rolando">Ludovica Rolando</name><name sortKey="Rolando, Ludovica" sort="Rolando, Ludovica" uniqKey="Rolando L" first="Ludovica" last="Rolando">Ludovica Rolando</name></country><country name="Espagne"><noRegion><name sortKey="Fernandez Lopez, Manuel" sort="Fernandez Lopez, Manuel" uniqKey="Fernandez Lopez M" first="Manuel" last="Fernandez-Lopez">Manuel Fernandez-Lopez</name></noRegion><name sortKey="Fernandez Gonzalez, Antonio Jose" sort="Fernandez Gonzalez, Antonio Jose" uniqKey="Fernandez Gonzalez A" first="Antonio José" last="Fernandez-Gonzalez">Antonio José Fernandez-Gonzalez</name><name sortKey="Villadas, Pablo Jose" sort="Villadas, Pablo Jose" uniqKey="Villadas P" first="Pablo José" last="Villadas">Pablo José Villadas</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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|texte= Characterization of the Belowground Microbial Community in a Poplar-Phytoremediation Strategy of a Multi-Contaminated Soil.
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